Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Col16a1Q8BLX7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC29.73■■■□□ 2.35
Col16a1Q8BLX7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC29.73■■■□□ 2.35
Col16a1Q8BLX7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Col16a1Q8BLX7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col16a1Q8BLX7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col16a1Q8BLX7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Col16a1Q8BLX7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Col16a1Q8BLX7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col16a1Q8BLX7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
Col16a1Q8BLX7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC29.7■■■□□ 2.34
Col16a1Q8BLX7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Gm16464-201ENSMUST00000117815 1095 ntBASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Gm21956-201ENSMUST00000179946 522 ntBASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col16a1Q8BLX7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col16a1Q8BLX7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
Col16a1Q8BLX7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col16a1Q8BLX7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col16a1Q8BLX7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col16a1Q8BLX7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Col16a1Q8BLX7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC29.67■■■□□ 2.34
Col16a1Q8BLX7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Col16a1Q8BLX7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Col16a1Q8BLX7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Col16a1Q8BLX7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Col16a1Q8BLX7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col16a1Q8BLX7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
Col16a1Q8BLX7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Col16a1Q8BLX7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Col16a1Q8BLX7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Col16a1Q8BLX7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.33
Col16a1Q8BLX7 Gm13241-201ENSMUST00000094493 780 ntBASIC29.63■■■□□ 2.33
Col16a1Q8BLX7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Col16a1Q8BLX7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC29.62■■■□□ 2.33
Col16a1Q8BLX7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Col16a1Q8BLX7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC29.61■■■□□ 2.33
Col16a1Q8BLX7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Col16a1Q8BLX7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Col16a1Q8BLX7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Col16a1Q8BLX7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Col16a1Q8BLX7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Col16a1Q8BLX7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Col16a1Q8BLX7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col16a1Q8BLX7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Col16a1Q8BLX7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Col16a1Q8BLX7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Col16a1Q8BLX7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Col16a1Q8BLX7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC29.57■■■□□ 2.32
Col16a1Q8BLX7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Col16a1Q8BLX7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Col16a1Q8BLX7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Col16a1Q8BLX7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Col16a1Q8BLX7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Col16a1Q8BLX7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Col16a1Q8BLX7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Col16a1Q8BLX7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC29.55■■■□□ 2.32
Col16a1Q8BLX7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.54■■■□□ 2.32
Col16a1Q8BLX7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Col16a1Q8BLX7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Col16a1Q8BLX7 Gm7417-201ENSMUST00000192950 473 ntBASIC29.54■■■□□ 2.32
Col16a1Q8BLX7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Col16a1Q8BLX7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
Col16a1Q8BLX7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Col16a1Q8BLX7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC29.52■■■□□ 2.32
Col16a1Q8BLX7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Col16a1Q8BLX7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Col16a1Q8BLX7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC29.51■■■□□ 2.31
Col16a1Q8BLX7 Gm22238-201ENSMUST00000175222 88 ntBASIC29.51■■■□□ 2.31
Col16a1Q8BLX7 Nsd1-206ENSMUST00000224918 1001 ntBASIC29.51■■■□□ 2.31
Col16a1Q8BLX7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC29.5■■■□□ 2.31
Col16a1Q8BLX7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Col16a1Q8BLX7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Col16a1Q8BLX7 Gm43034-201ENSMUST00000198678 1364 ntBASIC29.49■■■□□ 2.31
Col16a1Q8BLX7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC29.49■■■□□ 2.31
Col16a1Q8BLX7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Col16a1Q8BLX7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Col16a1Q8BLX7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC29.48■■■□□ 2.31
Col16a1Q8BLX7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Col16a1Q8BLX7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Col16a1Q8BLX7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Col16a1Q8BLX7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Col16a1Q8BLX7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC29.47■■■□□ 2.31
Col16a1Q8BLX7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC29.47■■■□□ 2.31
Col16a1Q8BLX7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Col16a1Q8BLX7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms