Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.61■■□□□ 1.21
Tnrc18Q80WC3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Tnrc18Q80WC3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Tnrc18Q80WC3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tnrc18Q80WC3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tnrc18Q80WC3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tnrc18Q80WC3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.59■■□□□ 1.21
Tnrc18Q80WC3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tnrc18Q80WC3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
Tnrc18Q80WC3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tnrc18Q80WC3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.59■■□□□ 1.21
Tnrc18Q80WC3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tnrc18Q80WC3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Tnrc18Q80WC3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Tnrc18Q80WC3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Tnrc18Q80WC3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Tnrc18Q80WC3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Tnrc18Q80WC3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc18Q80WC3 Gm27454-201ENSMUST00000185090 204 ntBASIC22.55■■□□□ 1.2
Tnrc18Q80WC3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tnrc18Q80WC3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tnrc18Q80WC3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Tnrc18Q80WC3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tnrc18Q80WC3 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.53■■□□□ 1.2
Tnrc18Q80WC3 Golgb1-201ENSMUST00000023534 498 ntBASIC22.53■■□□□ 1.2
Tnrc18Q80WC3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tnrc18Q80WC3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tnrc18Q80WC3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.52■■□□□ 1.2
Tnrc18Q80WC3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.52■■□□□ 1.2
Tnrc18Q80WC3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.52■■□□□ 1.2
Tnrc18Q80WC3 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.52■■□□□ 1.2
Tnrc18Q80WC3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.52■■□□□ 1.19
Tnrc18Q80WC3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.51■■□□□ 1.19
Tnrc18Q80WC3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tnrc18Q80WC3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Tnrc18Q80WC3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Tnrc18Q80WC3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Tnrc18Q80WC3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.5■■□□□ 1.19
Tnrc18Q80WC3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.5■■□□□ 1.19
Tnrc18Q80WC3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.5■■□□□ 1.19
Tnrc18Q80WC3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnrc18Q80WC3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.49■■□□□ 1.19
Tnrc18Q80WC3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnrc18Q80WC3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnrc18Q80WC3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Tnrc18Q80WC3 Gm40881-201ENSMUST00000223397 166 ntBASIC22.49■■□□□ 1.19
Tnrc18Q80WC3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnrc18Q80WC3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnrc18Q80WC3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Tnrc18Q80WC3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.48■■□□□ 1.19
Tnrc18Q80WC3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.48■■□□□ 1.19
Tnrc18Q80WC3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnrc18Q80WC3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnrc18Q80WC3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnrc18Q80WC3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnrc18Q80WC3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tnrc18Q80WC3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Tnrc18Q80WC3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tnrc18Q80WC3 Gm12821-201ENSMUST00000120022 600 ntBASIC22.46■■□□□ 1.19
Tnrc18Q80WC3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Tnrc18Q80WC3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc18Q80WC3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnrc18Q80WC3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tnrc18Q80WC3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tnrc18Q80WC3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tnrc18Q80WC3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.43■■□□□ 1.18
Tnrc18Q80WC3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnrc18Q80WC3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Tnrc18Q80WC3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.42■■□□□ 1.18
Tnrc18Q80WC3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.42■■□□□ 1.18
Tnrc18Q80WC3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.42■■□□□ 1.18
Tnrc18Q80WC3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.42■■□□□ 1.18
Tnrc18Q80WC3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tnrc18Q80WC3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Tnrc18Q80WC3 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.41■■□□□ 1.18
Tnrc18Q80WC3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms