Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC32.17■■■□□ 2.74
ShprhQ7TPQ3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
ShprhQ7TPQ3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC32.17■■■□□ 2.74
ShprhQ7TPQ3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ShprhQ7TPQ3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
ShprhQ7TPQ3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC32.15■■■□□ 2.74
ShprhQ7TPQ3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
ShprhQ7TPQ3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
ShprhQ7TPQ3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
ShprhQ7TPQ3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
ShprhQ7TPQ3 Gm16464-201ENSMUST00000117815 1095 ntBASIC32.14■■■□□ 2.74
ShprhQ7TPQ3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC32.14■■■□□ 2.74
ShprhQ7TPQ3 Nsd1-206ENSMUST00000224918 1001 ntBASIC32.14■■■□□ 2.74
ShprhQ7TPQ3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
ShprhQ7TPQ3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ShprhQ7TPQ3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ShprhQ7TPQ3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC32.12■■■□□ 2.73
ShprhQ7TPQ3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ShprhQ7TPQ3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
ShprhQ7TPQ3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ShprhQ7TPQ3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC32.11■■■□□ 2.73
ShprhQ7TPQ3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ShprhQ7TPQ3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC32.09■■■□□ 2.73
ShprhQ7TPQ3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ShprhQ7TPQ3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
ShprhQ7TPQ3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ShprhQ7TPQ3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ShprhQ7TPQ3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ShprhQ7TPQ3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC32.08■■■□□ 2.73
ShprhQ7TPQ3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
ShprhQ7TPQ3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC32.08■■■□□ 2.73
ShprhQ7TPQ3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.73
ShprhQ7TPQ3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ShprhQ7TPQ3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.06■■■□□ 2.72
ShprhQ7TPQ3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ShprhQ7TPQ3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
ShprhQ7TPQ3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
ShprhQ7TPQ3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
ShprhQ7TPQ3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
ShprhQ7TPQ3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ShprhQ7TPQ3 Etf1-202ENSMUST00000180351 108 ntBASIC32.05■■■□□ 2.72
ShprhQ7TPQ3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC32.05■■■□□ 2.72
ShprhQ7TPQ3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
ShprhQ7TPQ3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ShprhQ7TPQ3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ShprhQ7TPQ3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ShprhQ7TPQ3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ShprhQ7TPQ3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.03■■■□□ 2.72
ShprhQ7TPQ3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ShprhQ7TPQ3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ShprhQ7TPQ3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ShprhQ7TPQ3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ShprhQ7TPQ3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ShprhQ7TPQ3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC32.02■■■□□ 2.72
ShprhQ7TPQ3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC32.02■■■□□ 2.72
ShprhQ7TPQ3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC32.01■■■□□ 2.72
ShprhQ7TPQ3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
ShprhQ7TPQ3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ShprhQ7TPQ3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ShprhQ7TPQ3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
ShprhQ7TPQ3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC31.99■■■□□ 2.71
ShprhQ7TPQ3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC31.99■■■□□ 2.71
ShprhQ7TPQ3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ShprhQ7TPQ3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
ShprhQ7TPQ3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC31.99■■■□□ 2.71
ShprhQ7TPQ3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
ShprhQ7TPQ3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC31.98■■■□□ 2.71
ShprhQ7TPQ3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC31.98■■■□□ 2.71
ShprhQ7TPQ3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.98■■■□□ 2.71
ShprhQ7TPQ3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ShprhQ7TPQ3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC31.97■■■□□ 2.71
ShprhQ7TPQ3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ShprhQ7TPQ3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.97■■■□□ 2.71
ShprhQ7TPQ3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ShprhQ7TPQ3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ShprhQ7TPQ3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ShprhQ7TPQ3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC31.95■■■□□ 2.71
ShprhQ7TPQ3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC31.95■■■□□ 2.7
ShprhQ7TPQ3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC31.95■■■□□ 2.7
ShprhQ7TPQ3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC31.94■■■□□ 2.7
ShprhQ7TPQ3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ShprhQ7TPQ3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC31.92■■■□□ 2.7
ShprhQ7TPQ3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ShprhQ7TPQ3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.92■■■□□ 2.7
ShprhQ7TPQ3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
ShprhQ7TPQ3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ShprhQ7TPQ3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ShprhQ7TPQ3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ShprhQ7TPQ3 Gm21956-201ENSMUST00000179946 522 ntBASIC31.9■■■□□ 2.7
ShprhQ7TPQ3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ShprhQ7TPQ3 Gm28536-201ENSMUST00000190971 1317 ntBASIC31.9■■■□□ 2.7
ShprhQ7TPQ3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
ShprhQ7TPQ3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC31.9■■■□□ 2.7
ShprhQ7TPQ3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
ShprhQ7TPQ3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
ShprhQ7TPQ3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ShprhQ7TPQ3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ShprhQ7TPQ3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC31.89■■■□□ 2.7
ShprhQ7TPQ3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
ShprhQ7TPQ3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms