Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Nup98Q6PFD9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Nup98Q6PFD9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.61■■□□□ 1.85
Nup98Q6PFD9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.61■■□□□ 1.85
Nup98Q6PFD9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Nup98Q6PFD9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
Nup98Q6PFD9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Nup98Q6PFD9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Nup98Q6PFD9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Nup98Q6PFD9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.59■■□□□ 1.85
Nup98Q6PFD9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Nup98Q6PFD9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Nup98Q6PFD9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Nup98Q6PFD9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Nup98Q6PFD9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Nup98Q6PFD9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Nup98Q6PFD9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Nup98Q6PFD9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Nup98Q6PFD9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Nup98Q6PFD9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Nup98Q6PFD9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.56■■□□□ 1.84
Nup98Q6PFD9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nup98Q6PFD9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Nup98Q6PFD9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Nup98Q6PFD9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nup98Q6PFD9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nup98Q6PFD9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nup98Q6PFD9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.54■■□□□ 1.84
Nup98Q6PFD9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Nup98Q6PFD9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nup98Q6PFD9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Nup98Q6PFD9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nup98Q6PFD9 Gm10232-201ENSMUST00000089221 720 ntBASIC26.53■■□□□ 1.84
Nup98Q6PFD9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nup98Q6PFD9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nup98Q6PFD9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nup98Q6PFD9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nup98Q6PFD9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nup98Q6PFD9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nup98Q6PFD9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.52■■□□□ 1.84
Nup98Q6PFD9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.51■■□□□ 1.83
Nup98Q6PFD9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Nup98Q6PFD9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Nup98Q6PFD9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Nup98Q6PFD9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Nup98Q6PFD9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Nup98Q6PFD9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Nup98Q6PFD9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Nup98Q6PFD9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Nup98Q6PFD9 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.49■■□□□ 1.83
Nup98Q6PFD9 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.49■■□□□ 1.83
Nup98Q6PFD9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nup98Q6PFD9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nup98Q6PFD9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.49■■□□□ 1.83
Nup98Q6PFD9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Nup98Q6PFD9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Nup98Q6PFD9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Nup98Q6PFD9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Nup98Q6PFD9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nup98Q6PFD9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.47■■□□□ 1.83
Nup98Q6PFD9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Nup98Q6PFD9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nup98Q6PFD9 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.46■■□□□ 1.83
Nup98Q6PFD9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Nup98Q6PFD9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Nup98Q6PFD9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.46■■□□□ 1.83
Nup98Q6PFD9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Nup98Q6PFD9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Nup98Q6PFD9 Rps24-207ENSMUST00000224568 714 ntBASIC26.45■■□□□ 1.82
Nup98Q6PFD9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Nup98Q6PFD9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Nup98Q6PFD9 Gm9959-201ENSMUST00000068277 390 ntBASIC26.44■■□□□ 1.82
Nup98Q6PFD9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Nup98Q6PFD9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.42■■□□□ 1.82
Nup98Q6PFD9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.42■■□□□ 1.82
Nup98Q6PFD9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.42■■□□□ 1.82
Nup98Q6PFD9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nup98Q6PFD9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Nup98Q6PFD9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.42■■□□□ 1.82
Nup98Q6PFD9 Gm45102-201ENSMUST00000207427 857 ntBASIC26.42■■□□□ 1.82
Nup98Q6PFD9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nup98Q6PFD9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.41■■□□□ 1.82
Nup98Q6PFD9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nup98Q6PFD9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nup98Q6PFD9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Nup98Q6PFD9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nup98Q6PFD9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Nup98Q6PFD9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nup98Q6PFD9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Nup98Q6PFD9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Nup98Q6PFD9 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.39■■□□□ 1.82
Nup98Q6PFD9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms