Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smarcd3Q6P9Z1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.02■□□□□ 0.8
Smarcd3Q6P9Z1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd3Q6P9Z1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd3Q6P9Z1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.01■□□□□ 0.79
Smarcd3Q6P9Z1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smarcd3Q6P9Z1 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.01■□□□□ 0.79
Smarcd3Q6P9Z1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd3Q6P9Z1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd3Q6P9Z1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smarcd3Q6P9Z1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smarcd3Q6P9Z1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd3Q6P9Z1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd3Q6P9Z1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd3Q6P9Z1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd3Q6P9Z1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd3Q6P9Z1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd3Q6P9Z1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.98■□□□□ 0.79
Smarcd3Q6P9Z1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd3Q6P9Z1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd3Q6P9Z1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd3Q6P9Z1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Gm11599-201ENSMUST00000118720 878 ntBASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Gm45364-201ENSMUST00000210883 159 ntBASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd3Q6P9Z1 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Terc-201ENSMUST00000082862 423 ntBASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smarcd3Q6P9Z1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd3Q6P9Z1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd3Q6P9Z1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd3Q6P9Z1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd3Q6P9Z1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarcd3Q6P9Z1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd3Q6P9Z1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd3Q6P9Z1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd3Q6P9Z1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd3Q6P9Z1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd3Q6P9Z1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd3Q6P9Z1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd3Q6P9Z1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Smarcd3Q6P9Z1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd3Q6P9Z1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd3Q6P9Z1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.92■□□□□ 0.78
Smarcd3Q6P9Z1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd3Q6P9Z1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd3Q6P9Z1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarcd3Q6P9Z1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Smarcd3Q6P9Z1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd3Q6P9Z1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarcd3Q6P9Z1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd3Q6P9Z1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd3Q6P9Z1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd3Q6P9Z1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd3Q6P9Z1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarcd3Q6P9Z1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd3Q6P9Z1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd3Q6P9Z1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd3Q6P9Z1 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.89■□□□□ 0.77
Smarcd3Q6P9Z1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd3Q6P9Z1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd3Q6P9Z1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms