Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm7417-201ENSMUST00000192950 473 ntBASIC27.6■■■□□ 2.01
Col11a2Q64739 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col11a2Q64739 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col11a2Q64739 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC27.59■■■□□ 2.01
Col11a2Q64739 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col11a2Q64739 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col11a2Q64739 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.58■■■□□ 2.01
Col11a2Q64739 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Col11a2Q64739 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Col11a2Q64739 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Col11a2Q64739 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 2
Col11a2Q64739 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Col11a2Q64739 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC27.57■■■□□ 2
Col11a2Q64739 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC27.56■■■□□ 2
Col11a2Q64739 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.56■■■□□ 2
Col11a2Q64739 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Col11a2Q64739 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC27.56■■■□□ 2
Col11a2Q64739 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC27.55■■■□□ 2
Col11a2Q64739 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Col11a2Q64739 Gm9847-201ENSMUST00000052528 599 ntBASIC27.55■■■□□ 2
Col11a2Q64739 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC27.55■■■□□ 2
Col11a2Q64739 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC27.54■■■□□ 2
Col11a2Q64739 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.54■■■□□ 2
Col11a2Q64739 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Col11a2Q64739 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.53■■■□□ 2
Col11a2Q64739 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC27.53■■■□□ 2
Col11a2Q64739 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Col11a2Q64739 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
Col11a2Q64739 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 2
Col11a2Q64739 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC27.53■■■□□ 2
Col11a2Q64739 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Col11a2Q64739 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
Col11a2Q64739 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC27.53■■■□□ 2
Col11a2Q64739 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.53■■■□□ 2
Col11a2Q64739 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col11a2Q64739 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC27.52■■■□□ 2
Col11a2Q64739 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col11a2Q64739 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Col11a2Q64739 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col11a2Q64739 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col11a2Q64739 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col11a2Q64739 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC27.5■■□□□ 1.99
Col11a2Q64739 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Col11a2Q64739 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Col11a2Q64739 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Col11a2Q64739 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Col11a2Q64739 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
Col11a2Q64739 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Col11a2Q64739 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC27.48■■□□□ 1.99
Col11a2Q64739 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC27.48■■□□□ 1.99
Col11a2Q64739 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC27.47■■□□□ 1.99
Col11a2Q64739 Gm40881-201ENSMUST00000223397 166 ntBASIC27.47■■□□□ 1.99
Col11a2Q64739 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col11a2Q64739 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col11a2Q64739 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col11a2Q64739 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col11a2Q64739 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col11a2Q64739 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col11a2Q64739 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col11a2Q64739 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col11a2Q64739 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col11a2Q64739 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC27.46■■□□□ 1.99
Col11a2Q64739 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col11a2Q64739 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col11a2Q64739 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Col11a2Q64739 Gm28536-201ENSMUST00000190971 1317 ntBASIC27.45■■□□□ 1.99
Col11a2Q64739 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC27.45■■□□□ 1.99
Col11a2Q64739 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Col11a2Q64739 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Col11a2Q64739 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Col11a2Q64739 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC27.43■■□□□ 1.98
Col11a2Q64739 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Col11a2Q64739 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col11a2Q64739 Gm12922-201ENSMUST00000120626 809 ntBASIC27.41■■□□□ 1.98
Col11a2Q64739 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC27.41■■□□□ 1.98
Col11a2Q64739 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Col11a2Q64739 Gm27454-201ENSMUST00000185090 204 ntBASIC27.41■■□□□ 1.98
Col11a2Q64739 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Col11a2Q64739 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col11a2Q64739 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col11a2Q64739 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Col11a2Q64739 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col11a2Q64739 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC27.39■■□□□ 1.98
Col11a2Q64739 Nsd1-206ENSMUST00000224918 1001 ntBASIC27.39■■□□□ 1.98
Col11a2Q64739 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Col11a2Q64739 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Col11a2Q64739 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
Col11a2Q64739 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col11a2Q64739 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.38■■□□□ 1.97
Col11a2Q64739 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Col11a2Q64739 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col11a2Q64739 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Col11a2Q64739 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC27.38■■□□□ 1.97
Col11a2Q64739 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col11a2Q64739 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col11a2Q64739 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Col11a2Q64739 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col11a2Q64739 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col11a2Q64739 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col11a2Q64739 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC27.37■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms