Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Six3Q62233 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Six3Q62233 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Six3Q62233 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Six3Q62233 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Six3Q62233 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Six3Q62233 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Six3Q62233 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Six3Q62233 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six3Q62233 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six3Q62233 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six3Q62233 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six3Q62233 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Six3Q62233 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.4■■□□□ 1.02
Six3Q62233 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Six3Q62233 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.4■■□□□ 1.02
Six3Q62233 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Six3Q62233 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.39■■□□□ 1.02
Six3Q62233 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Six3Q62233 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Six3Q62233 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Six3Q62233 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Six3Q62233 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Six3Q62233 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Six3Q62233 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Six3Q62233 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Six3Q62233 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Six3Q62233 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.38■■□□□ 1.01
Six3Q62233 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Six3Q62233 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Six3Q62233 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Six3Q62233 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Six3Q62233 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Six3Q62233 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Six3Q62233 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Six3Q62233 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.37■■□□□ 1.01
Six3Q62233 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Six3Q62233 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Six3Q62233 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Six3Q62233 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Six3Q62233 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Six3Q62233 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.36■■□□□ 1.01
Six3Q62233 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Six3Q62233 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.36■■□□□ 1.01
Six3Q62233 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Six3Q62233 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Six3Q62233 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six3Q62233 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six3Q62233 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six3Q62233 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Six3Q62233 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.34■■□□□ 1.01
Six3Q62233 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Six3Q62233 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.34■■□□□ 1.01
Six3Q62233 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Six3Q62233 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six3Q62233 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Six3Q62233 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Six3Q62233 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Six3Q62233 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Six3Q62233 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Six3Q62233 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Six3Q62233 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Six3Q62233 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Six3Q62233 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Six3Q62233 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Six3Q62233 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Six3Q62233 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Six3Q62233 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Six3Q62233 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Six3Q62233 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Six3Q62233 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Six3Q62233 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.3■■□□□ 1
Six3Q62233 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Six3Q62233 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.3■■□□□ 1
Six3Q62233 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Six3Q62233 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.3■■□□□ 1
Six3Q62233 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.3■■□□□ 1
Six3Q62233 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.3■■□□□ 1
Six3Q62233 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.3■■□□□ 1
Six3Q62233 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Six3Q62233 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Six3Q62233 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.3■■□□□ 1
Six3Q62233 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
Six3Q62233 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Six3Q62233 Scarna2-201ENSMUST00000157560 414 ntBASIC21.29■■□□□ 1
Six3Q62233 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Six3Q62233 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.28■■□□□ 1
Six3Q62233 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.28■■□□□ 1
Six3Q62233 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Six3Q62233 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Six3Q62233 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Six3Q62233 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.28■■□□□ 1
Six3Q62233 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms