Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Zic4Q61467 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zic4Q61467 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zic4Q61467 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zic4Q61467 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.85■□□□□ 0.45
Zic4Q61467 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Zic4Q61467 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zic4Q61467 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.85■□□□□ 0.45
Zic4Q61467 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zic4Q61467 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zic4Q61467 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zic4Q61467 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zic4Q61467 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.85■□□□□ 0.45
Zic4Q61467 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Zic4Q61467 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Zic4Q61467 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zic4Q61467 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zic4Q61467 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zic4Q61467 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zic4Q61467 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Zic4Q61467 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zic4Q61467 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zic4Q61467 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Zic4Q61467 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zic4Q61467 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zic4Q61467 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.82■□□□□ 0.44
Zic4Q61467 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Zic4Q61467 Gm22567-201ENSMUST00000175542 342 ntBASIC17.82■□□□□ 0.44
Zic4Q61467 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zic4Q61467 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zic4Q61467 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zic4Q61467 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zic4Q61467 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zic4Q61467 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.81■□□□□ 0.44
Zic4Q61467 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Zic4Q61467 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zic4Q61467 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zic4Q61467 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.8■□□□□ 0.44
Zic4Q61467 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zic4Q61467 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zic4Q61467 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zic4Q61467 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Zic4Q61467 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zic4Q61467 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zic4Q61467 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zic4Q61467 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zic4Q61467 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zic4Q61467 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Zic4Q61467 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zic4Q61467 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zic4Q61467 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Zic4Q61467 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zic4Q61467 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zic4Q61467 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zic4Q61467 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zic4Q61467 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zic4Q61467 Gm45855-201ENSMUST00000212546 880 ntBASIC17.77■□□□□ 0.44
Zic4Q61467 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.77■□□□□ 0.44
Zic4Q61467 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Zic4Q61467 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Zic4Q61467 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zic4Q61467 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zic4Q61467 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zic4Q61467 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.76■□□□□ 0.43
Zic4Q61467 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zic4Q61467 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zic4Q61467 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zic4Q61467 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zic4Q61467 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zic4Q61467 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Zic4Q61467 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zic4Q61467 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zic4Q61467 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zic4Q61467 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Zic4Q61467 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zic4Q61467 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zic4Q61467 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zic4Q61467 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zic4Q61467 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zic4Q61467 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Zic4Q61467 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zic4Q61467 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zic4Q61467 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zic4Q61467 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zic4Q61467 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zic4Q61467 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zic4Q61467 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.72■□□□□ 0.43
Zic4Q61467 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zic4Q61467 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Zic4Q61467 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zic4Q61467 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zic4Q61467 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zic4Q61467 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zic4Q61467 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.71■□□□□ 0.43
Zic4Q61467 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.71■□□□□ 0.43
Zic4Q61467 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zic4Q61467 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zic4Q61467 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zic4Q61467 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zic4Q61467 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms