Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr1h4Q60641 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h4Q60641 Gm4799-201ENSMUST00000095396 657 ntBASIC20.81■□□□□ 0.92
Nr1h4Q60641 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr1h4Q60641 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.81■□□□□ 0.92
Nr1h4Q60641 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr1h4Q60641 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr1h4Q60641 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Nr1h4Q60641 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nr1h4Q60641 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.79■□□□□ 0.92
Nr1h4Q60641 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.78■□□□□ 0.92
Nr1h4Q60641 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 Gm9812-201ENSMUST00000061934 968 ntBASIC20.78■□□□□ 0.92
Nr1h4Q60641 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.78■□□□□ 0.92
Nr1h4Q60641 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr1h4Q60641 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.78■□□□□ 0.92
Nr1h4Q60641 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.77■□□□□ 0.92
Nr1h4Q60641 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.77■□□□□ 0.92
Nr1h4Q60641 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nr1h4Q60641 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Nr1h4Q60641 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nr1h4Q60641 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nr1h4Q60641 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Nr1h4Q60641 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nr1h4Q60641 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.76■□□□□ 0.91
Nr1h4Q60641 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nr1h4Q60641 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nr1h4Q60641 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nr1h4Q60641 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr1h4Q60641 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr1h4Q60641 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nr1h4Q60641 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr1h4Q60641 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
Nr1h4Q60641 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.74■□□□□ 0.91
Nr1h4Q60641 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Gm8503-201ENSMUST00000118131 455 ntBASIC20.74■□□□□ 0.91
Nr1h4Q60641 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.74■□□□□ 0.91
Nr1h4Q60641 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nr1h4Q60641 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1h4Q60641 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.73■□□□□ 0.91
Nr1h4Q60641 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1h4Q60641 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.73■□□□□ 0.91
Nr1h4Q60641 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1h4Q60641 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.73■□□□□ 0.91
Nr1h4Q60641 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.73■□□□□ 0.91
Nr1h4Q60641 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nr1h4Q60641 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1h4Q60641 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1h4Q60641 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1h4Q60641 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.71■□□□□ 0.91
Nr1h4Q60641 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1h4Q60641 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1h4Q60641 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1h4Q60641 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1h4Q60641 Gm22567-201ENSMUST00000175542 342 ntBASIC20.7■□□□□ 0.9
Nr1h4Q60641 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1h4Q60641 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1h4Q60641 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h4Q60641 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h4Q60641 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h4Q60641 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nr1h4Q60641 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.69■□□□□ 0.9
Nr1h4Q60641 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h4Q60641 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h4Q60641 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.68■□□□□ 0.9
Nr1h4Q60641 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.68■□□□□ 0.9
Nr1h4Q60641 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h4Q60641 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.68■□□□□ 0.9
Nr1h4Q60641 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h4Q60641 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nr1h4Q60641 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h4Q60641 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h4Q60641 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h4Q60641 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms