Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nhej1Q3KNJ2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nhej1Q3KNJ2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.38■■□□□ 1.33
Nhej1Q3KNJ2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nhej1Q3KNJ2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Nhej1Q3KNJ2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Nhej1Q3KNJ2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Nhej1Q3KNJ2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nhej1Q3KNJ2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Nhej1Q3KNJ2 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.37■■□□□ 1.33
Nhej1Q3KNJ2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nhej1Q3KNJ2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.37■■□□□ 1.33
Nhej1Q3KNJ2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nhej1Q3KNJ2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Nhej1Q3KNJ2 Gm22567-201ENSMUST00000175542 342 ntBASIC23.36■■□□□ 1.33
Nhej1Q3KNJ2 Gm45364-201ENSMUST00000210883 159 ntBASIC23.36■■□□□ 1.33
Nhej1Q3KNJ2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nhej1Q3KNJ2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nhej1Q3KNJ2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nhej1Q3KNJ2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nhej1Q3KNJ2 Gm7432-201ENSMUST00000210343 879 ntBASIC23.35■■□□□ 1.33
Nhej1Q3KNJ2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nhej1Q3KNJ2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nhej1Q3KNJ2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nhej1Q3KNJ2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nhej1Q3KNJ2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nhej1Q3KNJ2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nhej1Q3KNJ2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nhej1Q3KNJ2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Nhej1Q3KNJ2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.33■■□□□ 1.33
Nhej1Q3KNJ2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nhej1Q3KNJ2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Nhej1Q3KNJ2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nhej1Q3KNJ2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Nhej1Q3KNJ2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nhej1Q3KNJ2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nhej1Q3KNJ2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Nhej1Q3KNJ2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nhej1Q3KNJ2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Nhej1Q3KNJ2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nhej1Q3KNJ2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nhej1Q3KNJ2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nhej1Q3KNJ2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nhej1Q3KNJ2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.3■■□□□ 1.32
Nhej1Q3KNJ2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Nhej1Q3KNJ2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nhej1Q3KNJ2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nhej1Q3KNJ2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Nhej1Q3KNJ2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nhej1Q3KNJ2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nhej1Q3KNJ2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.27■■□□□ 1.32
Nhej1Q3KNJ2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nhej1Q3KNJ2 Gm11599-201ENSMUST00000118720 878 ntBASIC23.27■■□□□ 1.32
Nhej1Q3KNJ2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nhej1Q3KNJ2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nhej1Q3KNJ2 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.27■■□□□ 1.32
Nhej1Q3KNJ2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
Nhej1Q3KNJ2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nhej1Q3KNJ2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Nhej1Q3KNJ2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Nhej1Q3KNJ2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nhej1Q3KNJ2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nhej1Q3KNJ2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.25■■□□□ 1.31
Nhej1Q3KNJ2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nhej1Q3KNJ2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nhej1Q3KNJ2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.24■■□□□ 1.31
Nhej1Q3KNJ2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nhej1Q3KNJ2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Nhej1Q3KNJ2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Nhej1Q3KNJ2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nhej1Q3KNJ2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Nhej1Q3KNJ2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nhej1Q3KNJ2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nhej1Q3KNJ2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nhej1Q3KNJ2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nhej1Q3KNJ2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nhej1Q3KNJ2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.21■■□□□ 1.31
Nhej1Q3KNJ2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nhej1Q3KNJ2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Nhej1Q3KNJ2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nhej1Q3KNJ2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Nhej1Q3KNJ2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nhej1Q3KNJ2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Nhej1Q3KNJ2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nhej1Q3KNJ2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms