Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tff1Q08423 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tff1Q08423 Gm11687-201ENSMUST00000118911 886 ntBASIC18.07■□□□□ 0.48
Tff1Q08423 Scarna2-201ENSMUST00000157560 414 ntBASIC18.07■□□□□ 0.48
Tff1Q08423 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tff1Q08423 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.07■□□□□ 0.48
Tff1Q08423 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tff1Q08423 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tff1Q08423 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tff1Q08423 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tff1Q08423 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tff1Q08423 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tff1Q08423 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tff1Q08423 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.05■□□□□ 0.48
Tff1Q08423 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tff1Q08423 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tff1Q08423 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tff1Q08423 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.04■□□□□ 0.48
Tff1Q08423 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.04■□□□□ 0.48
Tff1Q08423 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tff1Q08423 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.04■□□□□ 0.48
Tff1Q08423 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.04■□□□□ 0.48
Tff1Q08423 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tff1Q08423 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tff1Q08423 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tff1Q08423 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tff1Q08423 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tff1Q08423 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tff1Q08423 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
Tff1Q08423 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.02■□□□□ 0.48
Tff1Q08423 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tff1Q08423 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tff1Q08423 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tff1Q08423 Gm9806-201ENSMUST00000051080 552 ntBASIC18.02■□□□□ 0.48
Tff1Q08423 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tff1Q08423 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tff1Q08423 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tff1Q08423 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tff1Q08423 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tff1Q08423 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tff1Q08423 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Tff1Q08423 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tff1Q08423 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.01■□□□□ 0.47
Tff1Q08423 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tff1Q08423 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tff1Q08423 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18■□□□□ 0.47
Tff1Q08423 Gm12366-201ENSMUST00000121722 873 ntBASIC18■□□□□ 0.47
Tff1Q08423 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18■□□□□ 0.47
Tff1Q08423 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tff1Q08423 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18■□□□□ 0.47
Tff1Q08423 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18■□□□□ 0.47
Tff1Q08423 Gm5786-201ENSMUST00000085368 882 ntBASIC18■□□□□ 0.47
Tff1Q08423 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tff1Q08423 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Tff1Q08423 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tff1Q08423 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tff1Q08423 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tff1Q08423 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tff1Q08423 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tff1Q08423 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tff1Q08423 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tff1Q08423 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Tff1Q08423 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tff1Q08423 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tff1Q08423 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tff1Q08423 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tff1Q08423 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tff1Q08423 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tff1Q08423 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tff1Q08423 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tff1Q08423 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tff1Q08423 Gm16437-201ENSMUST00000025669 507 ntBASIC17.97■□□□□ 0.47
Tff1Q08423 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tff1Q08423 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tff1Q08423 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tff1Q08423 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tff1Q08423 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.96■□□□□ 0.47
Tff1Q08423 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.96■□□□□ 0.47
Tff1Q08423 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tff1Q08423 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Tff1Q08423 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tff1Q08423 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.95■□□□□ 0.46
Tff1Q08423 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tff1Q08423 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms