Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HmgclP38060 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HmgclP38060 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HmgclP38060 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.68■■□□□ 1.06
HmgclP38060 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.68■■□□□ 1.06
HmgclP38060 Gm12366-201ENSMUST00000121722 873 ntBASIC21.68■■□□□ 1.06
HmgclP38060 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HmgclP38060 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.68■■□□□ 1.06
HmgclP38060 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.68■■□□□ 1.06
HmgclP38060 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HmgclP38060 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.68■■□□□ 1.06
HmgclP38060 Gm5786-201ENSMUST00000085368 882 ntBASIC21.68■■□□□ 1.06
HmgclP38060 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.68■■□□□ 1.06
HmgclP38060 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.67■■□□□ 1.06
HmgclP38060 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.67■■□□□ 1.06
HmgclP38060 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.67■■□□□ 1.06
HmgclP38060 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HmgclP38060 Gm7332-201ENSMUST00000118351 454 ntBASIC21.66■■□□□ 1.06
HmgclP38060 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.66■■□□□ 1.06
HmgclP38060 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.66■■□□□ 1.06
HmgclP38060 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HmgclP38060 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HmgclP38060 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HmgclP38060 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HmgclP38060 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HmgclP38060 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HmgclP38060 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.64■■□□□ 1.05
HmgclP38060 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HmgclP38060 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HmgclP38060 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HmgclP38060 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HmgclP38060 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HmgclP38060 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.63■■□□□ 1.05
HmgclP38060 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HmgclP38060 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HmgclP38060 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HmgclP38060 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HmgclP38060 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HmgclP38060 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HmgclP38060 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HmgclP38060 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HmgclP38060 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HmgclP38060 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
HmgclP38060 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HmgclP38060 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HmgclP38060 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.61■■□□□ 1.05
HmgclP38060 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HmgclP38060 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HmgclP38060 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HmgclP38060 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HmgclP38060 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HmgclP38060 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HmgclP38060 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HmgclP38060 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HmgclP38060 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HmgclP38060 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
HmgclP38060 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HmgclP38060 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.59■■□□□ 1.05
HmgclP38060 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HmgclP38060 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HmgclP38060 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HmgclP38060 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HmgclP38060 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HmgclP38060 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HmgclP38060 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HmgclP38060 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HmgclP38060 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HmgclP38060 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HmgclP38060 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HmgclP38060 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HmgclP38060 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HmgclP38060 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HmgclP38060 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HmgclP38060 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HmgclP38060 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HmgclP38060 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HmgclP38060 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HmgclP38060 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HmgclP38060 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.56■■□□□ 1.04
HmgclP38060 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HmgclP38060 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HmgclP38060 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.56■■□□□ 1.04
HmgclP38060 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HmgclP38060 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HmgclP38060 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HmgclP38060 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HmgclP38060 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.55■■□□□ 1.04
HmgclP38060 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HmgclP38060 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HmgclP38060 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HmgclP38060 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HmgclP38060 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HmgclP38060 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HmgclP38060 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HmgclP38060 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
HmgclP38060 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.53■■□□□ 1.04
HmgclP38060 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HmgclP38060 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HmgclP38060 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HmgclP38060 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms