Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a11P31650 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a11P31650 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Slc6a11P31650 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a11P31650 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.73■□□□□ 0.91
Slc6a11P31650 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a11P31650 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.73■□□□□ 0.91
Slc6a11P31650 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a11P31650 Gm4799-201ENSMUST00000095396 657 ntBASIC20.72■□□□□ 0.91
Slc6a11P31650 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a11P31650 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.72■□□□□ 0.91
Slc6a11P31650 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a11P31650 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a11P31650 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a11P31650 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a11P31650 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Slc6a11P31650 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a11P31650 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a11P31650 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.7■□□□□ 0.9
Slc6a11P31650 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a11P31650 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a11P31650 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a11P31650 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a11P31650 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a11P31650 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a11P31650 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Slc6a11P31650 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a11P31650 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a11P31650 Gm16437-201ENSMUST00000025669 507 ntBASIC20.69■□□□□ 0.9
Slc6a11P31650 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a11P31650 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a11P31650 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.69■□□□□ 0.9
Slc6a11P31650 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.68■□□□□ 0.9
Slc6a11P31650 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a11P31650 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a11P31650 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a11P31650 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a11P31650 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a11P31650 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.67■□□□□ 0.9
Slc6a11P31650 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a11P31650 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.67■□□□□ 0.9
Slc6a11P31650 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a11P31650 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Slc6a11P31650 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a11P31650 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.66■□□□□ 0.9
Slc6a11P31650 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a11P31650 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a11P31650 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slc6a11P31650 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a11P31650 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a11P31650 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Slc6a11P31650 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.65■□□□□ 0.9
Slc6a11P31650 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Slc6a11P31650 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a11P31650 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc6a11P31650 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a11P31650 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.64■□□□□ 0.89
Slc6a11P31650 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Slc6a11P31650 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a11P31650 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a11P31650 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a11P31650 Gm7332-201ENSMUST00000118351 454 ntBASIC20.63■□□□□ 0.89
Slc6a11P31650 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.63■□□□□ 0.89
Slc6a11P31650 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a11P31650 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a11P31650 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a11P31650 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slc6a11P31650 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a11P31650 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a11P31650 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a11P31650 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a11P31650 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.62■□□□□ 0.89
Slc6a11P31650 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.62■□□□□ 0.89
Slc6a11P31650 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a11P31650 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a11P31650 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a11P31650 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a11P31650 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a11P31650 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.61■□□□□ 0.89
Slc6a11P31650 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.61■□□□□ 0.89
Slc6a11P31650 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a11P31650 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a11P31650 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slc6a11P31650 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a11P31650 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a11P31650 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a11P31650 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a11P31650 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.6■□□□□ 0.89
Slc6a11P31650 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a11P31650 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Slc6a11P31650 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a11P31650 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Slc6a11P31650 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a11P31650 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a11P31650 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a11P31650 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc6a11P31650 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.59■□□□□ 0.89
Slc6a11P31650 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.59■□□□□ 0.89
Slc6a11P31650 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Slc6a11P31650 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms