Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PdgfbP31240 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.5■■□□□ 1.19
PdgfbP31240 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.5■■□□□ 1.19
PdgfbP31240 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PdgfbP31240 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PdgfbP31240 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PdgfbP31240 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PdgfbP31240 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PdgfbP31240 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PdgfbP31240 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PdgfbP31240 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
PdgfbP31240 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PdgfbP31240 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PdgfbP31240 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PdgfbP31240 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.47■■□□□ 1.19
PdgfbP31240 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PdgfbP31240 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PdgfbP31240 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PdgfbP31240 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.46■■□□□ 1.19
PdgfbP31240 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PdgfbP31240 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PdgfbP31240 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PdgfbP31240 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.45■■□□□ 1.18
PdgfbP31240 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PdgfbP31240 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PdgfbP31240 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PdgfbP31240 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
PdgfbP31240 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PdgfbP31240 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.42■■□□□ 1.18
PdgfbP31240 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PdgfbP31240 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.42■■□□□ 1.18
PdgfbP31240 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PdgfbP31240 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PdgfbP31240 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.42■■□□□ 1.18
PdgfbP31240 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PdgfbP31240 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PdgfbP31240 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PdgfbP31240 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
PdgfbP31240 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PdgfbP31240 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.41■■□□□ 1.18
PdgfbP31240 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.41■■□□□ 1.18
PdgfbP31240 Gm40881-201ENSMUST00000223397 166 ntBASIC22.41■■□□□ 1.18
PdgfbP31240 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PdgfbP31240 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PdgfbP31240 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PdgfbP31240 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PdgfbP31240 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PdgfbP31240 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PdgfbP31240 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PdgfbP31240 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.39■■□□□ 1.17
PdgfbP31240 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.39■■□□□ 1.17
PdgfbP31240 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PdgfbP31240 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfbP31240 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.38■■□□□ 1.17
PdgfbP31240 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.38■■□□□ 1.17
PdgfbP31240 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfbP31240 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.37■■□□□ 1.17
PdgfbP31240 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
PdgfbP31240 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PdgfbP31240 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.37■■□□□ 1.17
PdgfbP31240 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PdgfbP31240 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PdgfbP31240 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.36■■□□□ 1.17
PdgfbP31240 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PdgfbP31240 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PdgfbP31240 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PdgfbP31240 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PdgfbP31240 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PdgfbP31240 Gm12922-201ENSMUST00000120626 809 ntBASIC22.34■■□□□ 1.17
PdgfbP31240 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.34■■□□□ 1.17
PdgfbP31240 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.34■■□□□ 1.17
PdgfbP31240 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.34■■□□□ 1.17
PdgfbP31240 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PdgfbP31240 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PdgfbP31240 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PdgfbP31240 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PdgfbP31240 Gm27454-201ENSMUST00000185090 204 ntBASIC22.33■■□□□ 1.17
PdgfbP31240 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PdgfbP31240 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.33■■□□□ 1.17
PdgfbP31240 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PdgfbP31240 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PdgfbP31240 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.32■■□□□ 1.16
PdgfbP31240 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PdgfbP31240 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PdgfbP31240 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfbP31240 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PdgfbP31240 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfbP31240 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfbP31240 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfbP31240 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.31■■□□□ 1.16
PdgfbP31240 Gm45417-201ENSMUST00000209533 758 ntBASIC22.31■■□□□ 1.16
PdgfbP31240 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfbP31240 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfbP31240 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PdgfbP31240 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfbP31240 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfbP31240 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfbP31240 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PdgfbP31240 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.29■■□□□ 1.16
PdgfbP31240 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms