Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cx3cl1O35188 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cx3cl1O35188 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cx3cl1O35188 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.5■□□□□ 0.87
Cx3cl1O35188 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cx3cl1O35188 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.49■□□□□ 0.87
Cx3cl1O35188 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cx3cl1O35188 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.49■□□□□ 0.87
Cx3cl1O35188 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cx3cl1O35188 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cx3cl1O35188 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cx3cl1O35188 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cx3cl1O35188 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cx3cl1O35188 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cx3cl1O35188 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cx3cl1O35188 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cx3cl1O35188 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cx3cl1O35188 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cx3cl1O35188 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cx3cl1O35188 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cx3cl1O35188 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cx3cl1O35188 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cx3cl1O35188 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cx3cl1O35188 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cx3cl1O35188 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cx3cl1O35188 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cx3cl1O35188 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cx3cl1O35188 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cx3cl1O35188 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cx3cl1O35188 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cx3cl1O35188 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cx3cl1O35188 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cx3cl1O35188 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cx3cl1O35188 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cl1O35188 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cl1O35188 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cl1O35188 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cl1O35188 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cl1O35188 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cx3cl1O35188 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.45■□□□□ 0.86
Cx3cl1O35188 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cx3cl1O35188 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cx3cl1O35188 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cx3cl1O35188 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cx3cl1O35188 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.43■□□□□ 0.86
Cx3cl1O35188 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cx3cl1O35188 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cx3cl1O35188 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cx3cl1O35188 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cl1O35188 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cx3cl1O35188 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cx3cl1O35188 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cx3cl1O35188 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cx3cl1O35188 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.4■□□□□ 0.86
Cx3cl1O35188 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cx3cl1O35188 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cx3cl1O35188 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cx3cl1O35188 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cx3cl1O35188 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.39■□□□□ 0.85
Cx3cl1O35188 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cx3cl1O35188 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cx3cl1O35188 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cx3cl1O35188 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.39■□□□□ 0.85
Cx3cl1O35188 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cx3cl1O35188 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cx3cl1O35188 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.37■□□□□ 0.85
Cx3cl1O35188 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cx3cl1O35188 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cx3cl1O35188 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cx3cl1O35188 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cx3cl1O35188 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cx3cl1O35188 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cx3cl1O35188 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms