Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
AlyrefO08583 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
AlyrefO08583 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
AlyrefO08583 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
AlyrefO08583 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
AlyrefO08583 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.26■■□□□ 1.15
AlyrefO08583 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
AlyrefO08583 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.26■■□□□ 1.15
AlyrefO08583 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
AlyrefO08583 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
AlyrefO08583 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
AlyrefO08583 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
AlyrefO08583 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
AlyrefO08583 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
AlyrefO08583 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.25■■□□□ 1.15
AlyrefO08583 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
AlyrefO08583 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
AlyrefO08583 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
AlyrefO08583 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
AlyrefO08583 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
AlyrefO08583 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
AlyrefO08583 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
AlyrefO08583 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
AlyrefO08583 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.24■■□□□ 1.15
AlyrefO08583 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.24■■□□□ 1.15
AlyrefO08583 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
AlyrefO08583 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
AlyrefO08583 Gm27011-201ENSMUST00000182352 972 ntBASIC22.24■■□□□ 1.15
AlyrefO08583 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
AlyrefO08583 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
AlyrefO08583 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
AlyrefO08583 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
AlyrefO08583 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.24■■□□□ 1.15
AlyrefO08583 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
AlyrefO08583 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
AlyrefO08583 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.23■■□□□ 1.15
AlyrefO08583 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
AlyrefO08583 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
AlyrefO08583 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.22■■□□□ 1.15
AlyrefO08583 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
AlyrefO08583 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AlyrefO08583 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
AlyrefO08583 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AlyrefO08583 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AlyrefO08583 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
AlyrefO08583 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
AlyrefO08583 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
AlyrefO08583 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
AlyrefO08583 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
AlyrefO08583 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.2■■□□□ 1.14
AlyrefO08583 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.2■■□□□ 1.14
AlyrefO08583 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
AlyrefO08583 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
AlyrefO08583 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
AlyrefO08583 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
AlyrefO08583 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
AlyrefO08583 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.18■■□□□ 1.14
AlyrefO08583 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
AlyrefO08583 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.17■■□□□ 1.14
AlyrefO08583 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
AlyrefO08583 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
AlyrefO08583 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
AlyrefO08583 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
AlyrefO08583 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
AlyrefO08583 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
AlyrefO08583 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
AlyrefO08583 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.15■■□□□ 1.14
AlyrefO08583 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.15■■□□□ 1.14
AlyrefO08583 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
AlyrefO08583 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AlyrefO08583 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
AlyrefO08583 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
AlyrefO08583 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
AlyrefO08583 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
AlyrefO08583 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.13■■□□□ 1.13
AlyrefO08583 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
AlyrefO08583 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.13■■□□□ 1.13
AlyrefO08583 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
AlyrefO08583 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.13■■□□□ 1.13
AlyrefO08583 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
AlyrefO08583 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.12■■□□□ 1.13
AlyrefO08583 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
AlyrefO08583 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
AlyrefO08583 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
AlyrefO08583 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
AlyrefO08583 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
AlyrefO08583 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
AlyrefO08583 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
AlyrefO08583 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
AlyrefO08583 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
AlyrefO08583 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
AlyrefO08583 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms