Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
Hfm1D3Z4R1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Hfm1D3Z4R1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Hfm1D3Z4R1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Hfm1D3Z4R1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Hfm1D3Z4R1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Hfm1D3Z4R1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Hfm1D3Z4R1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Hfm1D3Z4R1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Hfm1D3Z4R1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Hfm1D3Z4R1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC31.8■■■□□ 2.68
Hfm1D3Z4R1 Gm9847-201ENSMUST00000052528 599 ntBASIC31.8■■■□□ 2.68
Hfm1D3Z4R1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Hfm1D3Z4R1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.8■■■□□ 2.68
Hfm1D3Z4R1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
Hfm1D3Z4R1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
Hfm1D3Z4R1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC31.78■■■□□ 2.68
Hfm1D3Z4R1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC31.78■■■□□ 2.68
Hfm1D3Z4R1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC31.78■■■□□ 2.68
Hfm1D3Z4R1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.77■■■□□ 2.68
Hfm1D3Z4R1 Serp2-204ENSMUST00000228055 705 ntBASIC31.77■■■□□ 2.68
Hfm1D3Z4R1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Hfm1D3Z4R1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Hfm1D3Z4R1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Hfm1D3Z4R1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC31.76■■■□□ 2.68
Hfm1D3Z4R1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Hfm1D3Z4R1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC31.75■■■□□ 2.67
Hfm1D3Z4R1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC31.75■■■□□ 2.67
Hfm1D3Z4R1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC31.75■■■□□ 2.67
Hfm1D3Z4R1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Hfm1D3Z4R1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Hfm1D3Z4R1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.74■■■□□ 2.67
Hfm1D3Z4R1 Gm40881-201ENSMUST00000223397 166 ntBASIC31.74■■■□□ 2.67
Hfm1D3Z4R1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Hfm1D3Z4R1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Hfm1D3Z4R1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Hfm1D3Z4R1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Hfm1D3Z4R1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Hfm1D3Z4R1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Hfm1D3Z4R1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Hfm1D3Z4R1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC31.72■■■□□ 2.67
Hfm1D3Z4R1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Hfm1D3Z4R1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.72■■■□□ 2.67
Hfm1D3Z4R1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Hfm1D3Z4R1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Hfm1D3Z4R1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Hfm1D3Z4R1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Hfm1D3Z4R1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Hfm1D3Z4R1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Hfm1D3Z4R1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Hfm1D3Z4R1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Hfm1D3Z4R1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC31.68■■■□□ 2.66
Hfm1D3Z4R1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Hfm1D3Z4R1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC31.67■■■□□ 2.66
Hfm1D3Z4R1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Hfm1D3Z4R1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Hfm1D3Z4R1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Hfm1D3Z4R1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Hfm1D3Z4R1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Hfm1D3Z4R1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.65■■■□□ 2.66
Hfm1D3Z4R1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Hfm1D3Z4R1 Gm12922-201ENSMUST00000120626 809 ntBASIC31.64■■■□□ 2.66
Hfm1D3Z4R1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
Hfm1D3Z4R1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.64■■■□□ 2.66
Hfm1D3Z4R1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hfm1D3Z4R1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Hfm1D3Z4R1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hfm1D3Z4R1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hfm1D3Z4R1 Gm28536-201ENSMUST00000190971 1317 ntBASIC31.62■■■□□ 2.65
Hfm1D3Z4R1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC31.62■■■□□ 2.65
Hfm1D3Z4R1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC31.62■■■□□ 2.65
Hfm1D3Z4R1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Hfm1D3Z4R1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hfm1D3Z4R1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Hfm1D3Z4R1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Hfm1D3Z4R1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hfm1D3Z4R1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hfm1D3Z4R1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hfm1D3Z4R1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Hfm1D3Z4R1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC31.59■■■□□ 2.65
Hfm1D3Z4R1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC31.59■■■□□ 2.65
Hfm1D3Z4R1 Nsd1-206ENSMUST00000224918 1001 ntBASIC31.59■■■□□ 2.65
Hfm1D3Z4R1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Hfm1D3Z4R1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC31.59■■■□□ 2.65
Hfm1D3Z4R1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC31.58■■■□□ 2.65
Hfm1D3Z4R1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.58■■■□□ 2.65
Hfm1D3Z4R1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Hfm1D3Z4R1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Hfm1D3Z4R1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Hfm1D3Z4R1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC31.58■■■□□ 2.65
Hfm1D3Z4R1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Hfm1D3Z4R1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC31.57■■■□□ 2.64
Hfm1D3Z4R1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms