Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptchd4B9EKX1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptchd4B9EKX1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptchd4B9EKX1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptchd4B9EKX1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.86■■□□□ 1.41
Ptchd4B9EKX1 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.86■■□□□ 1.41
Ptchd4B9EKX1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptchd4B9EKX1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Ptchd4B9EKX1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptchd4B9EKX1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptchd4B9EKX1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.84■■□□□ 1.41
Ptchd4B9EKX1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptchd4B9EKX1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ptchd4B9EKX1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ptchd4B9EKX1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.83■■□□□ 1.41
Ptchd4B9EKX1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.83■■□□□ 1.41
Ptchd4B9EKX1 Gm10232-201ENSMUST00000089221 720 ntBASIC23.83■■□□□ 1.41
Ptchd4B9EKX1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ptchd4B9EKX1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ptchd4B9EKX1 Gm14117-201ENSMUST00000122417 843 ntBASIC23.82■■□□□ 1.4
Ptchd4B9EKX1 Gm9959-201ENSMUST00000068277 390 ntBASIC23.82■■□□□ 1.4
Ptchd4B9EKX1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Ptchd4B9EKX1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptchd4B9EKX1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptchd4B9EKX1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ptchd4B9EKX1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptchd4B9EKX1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptchd4B9EKX1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptchd4B9EKX1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Ptchd4B9EKX1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptchd4B9EKX1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.8■■□□□ 1.4
Ptchd4B9EKX1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptchd4B9EKX1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptchd4B9EKX1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptchd4B9EKX1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ptchd4B9EKX1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptchd4B9EKX1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptchd4B9EKX1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.77■■□□□ 1.4
Ptchd4B9EKX1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ptchd4B9EKX1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptchd4B9EKX1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptchd4B9EKX1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ptchd4B9EKX1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ptchd4B9EKX1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptchd4B9EKX1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptchd4B9EKX1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.75■■□□□ 1.39
Ptchd4B9EKX1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptchd4B9EKX1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptchd4B9EKX1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptchd4B9EKX1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ptchd4B9EKX1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptchd4B9EKX1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptchd4B9EKX1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Ptchd4B9EKX1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptchd4B9EKX1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptchd4B9EKX1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ptchd4B9EKX1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ptchd4B9EKX1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Ptchd4B9EKX1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ptchd4B9EKX1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptchd4B9EKX1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.73■■□□□ 1.39
Ptchd4B9EKX1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptchd4B9EKX1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.72■■□□□ 1.39
Ptchd4B9EKX1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptchd4B9EKX1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.71■■□□□ 1.39
Ptchd4B9EKX1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptchd4B9EKX1 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.71■■□□□ 1.39
Ptchd4B9EKX1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ptchd4B9EKX1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ptchd4B9EKX1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
Ptchd4B9EKX1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ptchd4B9EKX1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ptchd4B9EKX1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptchd4B9EKX1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.7■■□□□ 1.38
Ptchd4B9EKX1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ptchd4B9EKX1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptchd4B9EKX1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptchd4B9EKX1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Ptchd4B9EKX1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ptchd4B9EKX1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptchd4B9EKX1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.68■■□□□ 1.38
Ptchd4B9EKX1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ptchd4B9EKX1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptchd4B9EKX1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.67■■□□□ 1.38
Ptchd4B9EKX1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptchd4B9EKX1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.67■■□□□ 1.38
Ptchd4B9EKX1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptchd4B9EKX1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptchd4B9EKX1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ptchd4B9EKX1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ptchd4B9EKX1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms