Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Ubr4A2AN08 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr4A2AN08 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.17□□□□□ -0.46
Ubr4A2AN08 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Ubr4A2AN08 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.17□□□□□ -0.46
Ubr4A2AN08 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.17□□□□□ -0.46
Ubr4A2AN08 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubr4A2AN08 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubr4A2AN08 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubr4A2AN08 Gm27405-201ENSMUST00000184201 112 ntBASIC12.16□□□□□ -0.46
Ubr4A2AN08 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.16□□□□□ -0.46
Ubr4A2AN08 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Ubr4A2AN08 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubr4A2AN08 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.16□□□□□ -0.46
Ubr4A2AN08 Gm10252-201ENSMUST00000209541 832 ntBASIC12.16□□□□□ -0.46
Ubr4A2AN08 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubr4A2AN08 Gm40881-201ENSMUST00000223397 166 ntBASIC12.15□□□□□ -0.46
Ubr4A2AN08 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
Ubr4A2AN08 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubr4A2AN08 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Ubr4A2AN08 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Ubr4A2AN08 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.14□□□□□ -0.47
Ubr4A2AN08 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubr4A2AN08 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.14□□□□□ -0.47
Ubr4A2AN08 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr4A2AN08 Gm6139-201ENSMUST00000079261 882 ntBASIC12.13□□□□□ -0.47
Ubr4A2AN08 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr4A2AN08 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr4A2AN08 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ubr4A2AN08 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr4A2AN08 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.13□□□□□ -0.47
Ubr4A2AN08 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubr4A2AN08 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr4A2AN08 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr4A2AN08 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.11□□□□□ -0.47
Ubr4A2AN08 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr4A2AN08 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.11□□□□□ -0.47
Ubr4A2AN08 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Gm25925-201ENSMUST00000158314 306 ntBASIC12.11□□□□□ -0.47
Ubr4A2AN08 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr4A2AN08 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.1□□□□□ -0.47
Ubr4A2AN08 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ubr4A2AN08 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubr4A2AN08 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC12.1□□□□□ -0.47
Ubr4A2AN08 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.1□□□□□ -0.47
Ubr4A2AN08 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubr4A2AN08 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubr4A2AN08 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubr4A2AN08 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubr4A2AN08 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC12.09□□□□□ -0.47
Ubr4A2AN08 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubr4A2AN08 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.09□□□□□ -0.47
Ubr4A2AN08 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubr4A2AN08 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubr4A2AN08 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubr4A2AN08 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.08□□□□□ -0.47
Ubr4A2AN08 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.08□□□□□ -0.47
Ubr4A2AN08 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.08□□□□□ -0.47
Ubr4A2AN08 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.08□□□□□ -0.48
Ubr4A2AN08 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.08□□□□□ -0.48
Ubr4A2AN08 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubr4A2AN08 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubr4A2AN08 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ubr4A2AN08 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ubr4A2AN08 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubr4A2AN08 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubr4A2AN08 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ubr4A2AN08 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.07□□□□□ -0.48
Ubr4A2AN08 Gm42569-201ENSMUST00000200539 472 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms