Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav12-1A0N8R1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav12-1A0N8R1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav12-1A0N8R1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.33■□□□□ 0.53
Trav12-1A0N8R1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav12-1A0N8R1 Terc-201ENSMUST00000082862 423 ntBASIC18.33■□□□□ 0.52
Trav12-1A0N8R1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav12-1A0N8R1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12-1A0N8R1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav12-1A0N8R1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 Gm45364-201ENSMUST00000210883 159 ntBASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.3■□□□□ 0.52
Trav12-1A0N8R1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.29■□□□□ 0.52
Trav12-1A0N8R1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav12-1A0N8R1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12-1A0N8R1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav12-1A0N8R1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav12-1A0N8R1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12-1A0N8R1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12-1A0N8R1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trav12-1A0N8R1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav12-1A0N8R1 Gm7432-201ENSMUST00000210343 879 ntBASIC18.27■□□□□ 0.52
Trav12-1A0N8R1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav12-1A0N8R1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.27■□□□□ 0.51
Trav12-1A0N8R1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12-1A0N8R1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12-1A0N8R1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.26■□□□□ 0.51
Trav12-1A0N8R1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.26■□□□□ 0.51
Trav12-1A0N8R1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trav12-1A0N8R1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Trav12-1A0N8R1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12-1A0N8R1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.25■□□□□ 0.51
Trav12-1A0N8R1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12-1A0N8R1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12-1A0N8R1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12-1A0N8R1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12-1A0N8R1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12-1A0N8R1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.23■□□□□ 0.51
Trav12-1A0N8R1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav12-1A0N8R1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12-1A0N8R1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav12-1A0N8R1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12-1A0N8R1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav12-1A0N8R1 Gm11599-201ENSMUST00000118720 878 ntBASIC18.22■□□□□ 0.51
Trav12-1A0N8R1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12-1A0N8R1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12-1A0N8R1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav12-1A0N8R1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav12-1A0N8R1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav12-1A0N8R1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav12-1A0N8R1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav12-1A0N8R1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12-1A0N8R1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav12-1A0N8R1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-1A0N8R1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-1A0N8R1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-1A0N8R1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-1A0N8R1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12-1A0N8R1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Trav12-1A0N8R1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms