Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28729A0A1B0GSW2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28729A0A1B0GSW2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28729A0A1B0GSW2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Gm10232-201ENSMUST00000089221 720 ntBASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm28729A0A1B0GSW2 Gm15039-201ENSMUST00000118914 875 ntBASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Gm28729A0A1B0GSW2 Etf1-202ENSMUST00000180351 108 ntBASIC21.61■■□□□ 1.05
Gm28729A0A1B0GSW2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28729A0A1B0GSW2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28729A0A1B0GSW2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28729A0A1B0GSW2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28729A0A1B0GSW2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28729A0A1B0GSW2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28729A0A1B0GSW2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms