Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-4A0A0G2JG01 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13n-4A0A0G2JG01 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-4A0A0G2JG01 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-4A0A0G2JG01 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-4A0A0G2JG01 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.63■□□□□ 0.41
Trav13n-4A0A0G2JG01 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav13n-4A0A0G2JG01 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-4A0A0G2JG01 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-4A0A0G2JG01 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13n-4A0A0G2JG01 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav13n-4A0A0G2JG01 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13n-4A0A0G2JG01 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Gm9812-201ENSMUST00000061934 968 ntBASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Trav13n-4A0A0G2JG01 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav13n-4A0A0G2JG01 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav13n-4A0A0G2JG01 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13n-4A0A0G2JG01 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13n-4A0A0G2JG01 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13n-4A0A0G2JG01 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13n-4A0A0G2JG01 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13n-4A0A0G2JG01 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trav13n-4A0A0G2JG01 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav13n-4A0A0G2JG01 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13n-4A0A0G2JG01 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav13n-4A0A0G2JG01 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13n-4A0A0G2JG01 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13n-4A0A0G2JG01 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav13n-4A0A0G2JG01 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13n-4A0A0G2JG01 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav13n-4A0A0G2JG01 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav13n-4A0A0G2JG01 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13n-4A0A0G2JG01 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13n-4A0A0G2JG01 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav13n-4A0A0G2JG01 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13n-4A0A0G2JG01 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13n-4A0A0G2JG01 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13n-4A0A0G2JG01 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav13n-4A0A0G2JG01 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13n-4A0A0G2JG01 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13n-4A0A0G2JG01 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13n-4A0A0G2JG01 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-4A0A0G2JG01 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13n-4A0A0G2JG01 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13n-4A0A0G2JG01 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13n-4A0A0G2JG01 Gm10420-201ENSMUST00000121713 882 ntBASIC17.54■□□□□ 0.4
Trav13n-4A0A0G2JG01 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav13n-4A0A0G2JG01 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13n-4A0A0G2JG01 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13n-4A0A0G2JG01 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav13n-4A0A0G2JG01 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.53■□□□□ 0.4
Trav13n-4A0A0G2JG01 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13n-4A0A0G2JG01 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms