Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7-4A0A075B6C1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7-4A0A075B6C1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav7-4A0A075B6C1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav7-4A0A075B6C1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav7-4A0A075B6C1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav7-4A0A075B6C1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav7-4A0A075B6C1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav7-4A0A075B6C1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav7-4A0A075B6C1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav7-4A0A075B6C1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav7-4A0A075B6C1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7-4A0A075B6C1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav7-4A0A075B6C1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.73■□□□□ 0.27
Trav7-4A0A075B6C1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7-4A0A075B6C1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7-4A0A075B6C1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.72■□□□□ 0.27
Trav7-4A0A075B6C1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7-4A0A075B6C1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7-4A0A075B6C1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7-4A0A075B6C1 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.71■□□□□ 0.27
Trav7-4A0A075B6C1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7-4A0A075B6C1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trav7-4A0A075B6C1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7-4A0A075B6C1 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Trav7-4A0A075B6C1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7-4A0A075B6C1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7-4A0A075B6C1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Trav7-4A0A075B6C1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7-4A0A075B6C1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7-4A0A075B6C1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7-4A0A075B6C1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7-4A0A075B6C1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav7-4A0A075B6C1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7-4A0A075B6C1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7-4A0A075B6C1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7-4A0A075B6C1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trav7-4A0A075B6C1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7-4A0A075B6C1 Gm24804-201ENSMUST00000174982 85 ntBASIC16.64■□□□□ 0.25
Trav7-4A0A075B6C1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7-4A0A075B6C1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7-4A0A075B6C1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7-4A0A075B6C1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7-4A0A075B6C1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7-4A0A075B6C1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7-4A0A075B6C1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trav7-4A0A075B6C1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav7-4A0A075B6C1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7-4A0A075B6C1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav7-4A0A075B6C1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav7-4A0A075B6C1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms