Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-5A0A075B6B5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-5A0A075B6B5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-5A0A075B6B5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-5A0A075B6B5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav6-5A0A075B6B5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav6-5A0A075B6B5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-5A0A075B6B5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-5A0A075B6B5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-5A0A075B6B5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Trav6-5A0A075B6B5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav6-5A0A075B6B5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-5A0A075B6B5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trav6-5A0A075B6B5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-5A0A075B6B5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-5A0A075B6B5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-5A0A075B6B5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-5A0A075B6B5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-5A0A075B6B5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17■□□□□ 0.31
Trav6-5A0A075B6B5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17■□□□□ 0.31
Trav6-5A0A075B6B5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6-5A0A075B6B5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17■□□□□ 0.31
Trav6-5A0A075B6B5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-5A0A075B6B5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Gm22567-201ENSMUST00000175542 342 ntBASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6-5A0A075B6B5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Trav6-5A0A075B6B5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav6-5A0A075B6B5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-5A0A075B6B5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-5A0A075B6B5 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.96■□□□□ 0.31
Trav6-5A0A075B6B5 Zfp131-205ENSMUST00000223812 663 ntBASIC16.96■□□□□ 0.31
Trav6-5A0A075B6B5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-5A0A075B6B5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-5A0A075B6B5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-5A0A075B6B5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-5A0A075B6B5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6-5A0A075B6B5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-5A0A075B6B5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-5A0A075B6B5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-5A0A075B6B5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-5A0A075B6B5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav6-5A0A075B6B5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-5A0A075B6B5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav6-5A0A075B6B5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-5A0A075B6B5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-5A0A075B6B5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-5A0A075B6B5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-5A0A075B6B5 Gm37136-201ENSMUST00000194368 194 ntBASIC16.93■□□□□ 0.3
Trav6-5A0A075B6B5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-5A0A075B6B5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-5A0A075B6B5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-5A0A075B6B5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav6-5A0A075B6B5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav6-5A0A075B6B5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-5A0A075B6B5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-5A0A075B6B5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav6-5A0A075B6B5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-5A0A075B6B5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-5A0A075B6B5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-5A0A075B6B5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-5A0A075B6B5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-5A0A075B6B5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-5A0A075B6B5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-5A0A075B6B5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-5A0A075B6B5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Trav6-5A0A075B6B5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6-5A0A075B6B5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-5A0A075B6B5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-5A0A075B6B5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6-5A0A075B6B5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Trav6-5A0A075B6B5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-5A0A075B6B5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-5A0A075B6B5 Gm9397-201ENSMUST00000200125 605 ntBASIC16.89■□□□□ 0.29
Trav6-5A0A075B6B5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-5A0A075B6B5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms