Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trav16nA0A075B634 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16nA0A075B634 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16nA0A075B634 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16nA0A075B634 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16nA0A075B634 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav16nA0A075B634 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav16nA0A075B634 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav16nA0A075B634 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav16nA0A075B634 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav16nA0A075B634 Nkain2-201ENSMUST00000092602 558 ntBASIC16.52■□□□□ 0.24
Trav16nA0A075B634 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav16nA0A075B634 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav16nA0A075B634 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16nA0A075B634 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav16nA0A075B634 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16nA0A075B634 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16nA0A075B634 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav16nA0A075B634 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16nA0A075B634 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16nA0A075B634 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16nA0A075B634 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16nA0A075B634 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16nA0A075B634 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav16nA0A075B634 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav16nA0A075B634 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav16nA0A075B634 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav16nA0A075B634 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav16nA0A075B634 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav16nA0A075B634 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav16nA0A075B634 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav16nA0A075B634 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16nA0A075B634 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav16nA0A075B634 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16nA0A075B634 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16nA0A075B634 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav16nA0A075B634 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav16nA0A075B634 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav16nA0A075B634 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav16nA0A075B634 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trav16nA0A075B634 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16nA0A075B634 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16nA0A075B634 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav16nA0A075B634 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Trav16nA0A075B634 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav16nA0A075B634 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav16nA0A075B634 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav16nA0A075B634 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trav16nA0A075B634 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16nA0A075B634 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16nA0A075B634 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16nA0A075B634 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16nA0A075B634 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav16nA0A075B634 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.41■□□□□ 0.22
Trav16nA0A075B634 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav16nA0A075B634 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.39■□□□□ 0.21
Trav16nA0A075B634 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms