Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
Trav1A0A075B5Z4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav1A0A075B5Z4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trav1A0A075B5Z4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav1A0A075B5Z4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Trav1A0A075B5Z4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav1A0A075B5Z4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav1A0A075B5Z4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav1A0A075B5Z4 Gm44428-201ENSMUST00000204474 874 ntBASIC20.48■□□□□ 0.87
Trav1A0A075B5Z4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trav1A0A075B5Z4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav1A0A075B5Z4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav1A0A075B5Z4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav1A0A075B5Z4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav1A0A075B5Z4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav1A0A075B5Z4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav1A0A075B5Z4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav1A0A075B5Z4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trav1A0A075B5Z4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav1A0A075B5Z4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav1A0A075B5Z4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav1A0A075B5Z4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav1A0A075B5Z4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav1A0A075B5Z4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.44■□□□□ 0.86
Trav1A0A075B5Z4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav1A0A075B5Z4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trav1A0A075B5Z4 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.43■□□□□ 0.86
Trav1A0A075B5Z4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav1A0A075B5Z4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trav1A0A075B5Z4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav1A0A075B5Z4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav1A0A075B5Z4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav1A0A075B5Z4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav1A0A075B5Z4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav1A0A075B5Z4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav1A0A075B5Z4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav1A0A075B5Z4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav1A0A075B5Z4 Scarna2-201ENSMUST00000157560 414 ntBASIC20.39■□□□□ 0.85
Trav1A0A075B5Z4 Gm9806-201ENSMUST00000051080 552 ntBASIC20.39■□□□□ 0.85
Trav1A0A075B5Z4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trav1A0A075B5Z4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav1A0A075B5Z4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trav1A0A075B5Z4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.38■□□□□ 0.85
Trav1A0A075B5Z4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.38■□□□□ 0.85
Trav1A0A075B5Z4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav1A0A075B5Z4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav1A0A075B5Z4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.38■□□□□ 0.85
Trav1A0A075B5Z4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.37■□□□□ 0.85
Trav1A0A075B5Z4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trav1A0A075B5Z4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav1A0A075B5Z4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.37■□□□□ 0.85
Trav1A0A075B5Z4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav1A0A075B5Z4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav1A0A075B5Z4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav1A0A075B5Z4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Gm16437-201ENSMUST00000025669 507 ntBASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav1A0A075B5Z4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms