Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Gm12882-201ENSMUST00000121696 517 ntBASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Mir6990-201ENSMUST00000183724 91 ntBASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Gm27397-201ENSMUST00000184997 107 ntBASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Gm2213-201ENSMUST00000197485 688 ntBASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb2S4R1M3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb2S4R1M3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm29310-201ENSMUST00000185468 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21825-201ENSMUST00000185728 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm29109-201ENSMUST00000185895 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21896-201ENSMUST00000186520 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21873-201ENSMUST00000186728 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21794-201ENSMUST00000187056 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21880-201ENSMUST00000187275 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21826-201ENSMUST00000187451 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21198-201ENSMUST00000188393 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21749-201ENSMUST00000189343 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21901-201ENSMUST00000189568 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm29424-201ENSMUST00000189716 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm28599-201ENSMUST00000189838 694 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21867-201ENSMUST00000189917 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm29269-201ENSMUST00000190087 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21722-201ENSMUST00000190153 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm28423-201ENSMUST00000190701 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21899-201ENSMUST00000190745 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21910-201ENSMUST00000191163 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21849-201ENSMUST00000191571 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm28678-201ENSMUST00000191593 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm20910-201ENSMUST00000193268 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Gm21871-201ENSMUST00000194621 696 ntBASIC14.27□□□□□ -0.13
H2afb2S4R1M3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb2S4R1M3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm14822-201ENSMUST00000122247 291 ntBASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms