Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Gm5177-201ENSMUST00000183092 997 ntBASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Gm27301-201ENSMUST00000184012 127 ntBASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Gm45098-201ENSMUST00000207179 657 ntBASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
H2afb3S4R1G7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Gm14140-201ENSMUST00000119999 995 ntBASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H2afb3S4R1G7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms