Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.69□□□□□ -0.22
Ccdc166S4R181 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Gm10275-202ENSMUST00000168697 495 ntBASIC13.69□□□□□ -0.22
Ccdc166S4R181 Gm9794-201ENSMUST00000202370 423 ntBASIC13.69□□□□□ -0.22
Ccdc166S4R181 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Gm16476-201ENSMUST00000221544 139 ntBASIC13.69□□□□□ -0.22
Ccdc166S4R181 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Gm10275-201ENSMUST00000092620 635 ntBASIC13.69□□□□□ -0.22
Ccdc166S4R181 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc166S4R181 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gm14719-201ENSMUST00000121891 340 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc166S4R181 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gm46209-201ENSMUST00000217912 553 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gm9063-201ENSMUST00000223299 582 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Mir125a-201ENSMUST00000083545 68 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.68□□□□□ -0.22
Ccdc166S4R181 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc166S4R181 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.67□□□□□ -0.22
Ccdc166S4R181 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Gm15487-201ENSMUST00000122373 465 ntBASIC13.67□□□□□ -0.22
Ccdc166S4R181 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Gm18187-201ENSMUST00000196476 984 ntBASIC13.67□□□□□ -0.22
Ccdc166S4R181 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.67□□□□□ -0.22
Ccdc166S4R181 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc166S4R181 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms