Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm6415-201ENSMUST00000118488 348 ntBASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mrpl40Q9Z2Q5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm17837-201ENSMUST00000186435 985 ntBASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mrpl40Q9Z2Q5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms