Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm8097-201ENSMUST00000117903 829 ntBASIC11.12□□□□□ -0.63
CcsQ9WU84 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Gm10060-201ENSMUST00000212002 111 ntBASIC11.12□□□□□ -0.63
CcsQ9WU84 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.12□□□□□ -0.63
CcsQ9WU84 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.12□□□□□ -0.63
CcsQ9WU84 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
CcsQ9WU84 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CcsQ9WU84 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CcsQ9WU84 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CcsQ9WU84 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.11□□□□□ -0.63
CcsQ9WU84 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.11□□□□□ -0.63
CcsQ9WU84 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.11□□□□□ -0.63
CcsQ9WU84 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.11□□□□□ -0.63
CcsQ9WU84 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.11□□□□□ -0.63
CcsQ9WU84 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CcsQ9WU84 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CcsQ9WU84 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.11□□□□□ -0.63
CcsQ9WU84 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.11□□□□□ -0.63
CcsQ9WU84 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.11□□□□□ -0.63
CcsQ9WU84 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CcsQ9WU84 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm7230-201ENSMUST00000173026 815 ntBASIC11.1□□□□□ -0.63
CcsQ9WU84 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.1□□□□□ -0.63
CcsQ9WU84 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm2651-201ENSMUST00000203560 838 ntBASIC11.1□□□□□ -0.63
CcsQ9WU84 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CcsQ9WU84 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms