Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.08□□□□□ -0.48
Six6Q9QZ28 Gm15358-201ENSMUST00000119249 520 ntBASIC12.08□□□□□ -0.48
Six6Q9QZ28 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six6Q9QZ28 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.07□□□□□ -0.48
Six6Q9QZ28 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.07□□□□□ -0.48
Six6Q9QZ28 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.07□□□□□ -0.48
Six6Q9QZ28 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six6Q9QZ28 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.06□□□□□ -0.48
Six6Q9QZ28 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six6Q9QZ28 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms