Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Gm13453-201ENSMUST00000118708 357 ntBASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Gm27321-201ENSMUST00000185021 205 ntBASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Gm44872-201ENSMUST00000207864 420 ntBASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk3aQ9JKX8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Gm14767-201ENSMUST00000121559 586 ntBASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Gm44344-201ENSMUST00000200287 129 ntBASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Gm46209-201ENSMUST00000217912 553 ntBASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk3aQ9JKX8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk3aQ9JKX8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms