Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco4Q9JIS3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Gm10052-201ENSMUST00000168019 960 ntBASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Gm7729-201ENSMUST00000050143 801 ntBASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco4Q9JIS3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.42□□□□□ -0.58
Smco4Q9JIS3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.42□□□□□ -0.58
Smco4Q9JIS3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms