Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.11□□□□□ -0.15
Lima1Q9ERG0 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lima1Q9ERG0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lima1Q9ERG0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.09□□□□□ -0.15
Lima1Q9ERG0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Gm9726-201ENSMUST00000180321 678 ntBASIC14.09□□□□□ -0.15
Lima1Q9ERG0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lima1Q9ERG0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms