Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mir6956-201ENSMUST00000183598 62 ntBASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tubb3Q9ERD7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.17□□□□□ -0.14
Tubb3Q9ERD7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Gm6973-201ENSMUST00000117080 721 ntBASIC14.16□□□□□ -0.14
Tubb3Q9ERD7 Gm13464-201ENSMUST00000119418 935 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms