Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Gm45930-201ENSMUST00000221330 292 ntBASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-4Q9EQM3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Sybu-209ENSMUST00000228639 4113 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm11803-201ENSMUST00000119966 444 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Gm7783-201ENSMUST00000204795 781 ntBASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nkx2-4Q9EQM3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-4Q9EQM3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms