Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Gm11478-201ENSMUST00000117851 599 ntBASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Gm5035-201ENSMUST00000215581 927 ntBASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC19.49■□□□□ 0.71
Cpsf1Q9EPU4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Nupl1-207ENSMUST00000225311 2475 ntBASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Gm43094-201ENSMUST00000196549 921 ntBASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cpsf1Q9EPU4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Gm15889-202ENSMUST00000212669 2443 ntBASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Gm11918-201ENSMUST00000121660 179 ntBASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
Cpsf1Q9EPU4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Gm15806-201ENSMUST00000120696 955 ntBASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Gm2495-201ENSMUST00000191160 466 ntBASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC19.46■□□□□ 0.71
Cpsf1Q9EPU4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
Cpsf1Q9EPU4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Gm18934-201ENSMUST00000216671 1044 ntBASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cpsf1Q9EPU4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms