Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssr3Q9DCF9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gm17808-201ENSMUST00000200859 894 ntBASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssr3Q9DCF9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Gm8749-201ENSMUST00000117737 331 ntBASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Gm27867-201ENSMUST00000184778 125 ntBASIC12.73□□□□□ -0.37
Ssr3Q9DCF9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms