Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp8Q9DB85 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Gm11425-201ENSMUST00000119608 498 ntBASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Gm27892-201ENSMUST00000185017 106 ntBASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Mir7654-201ENSMUST00000185082 70 ntBASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Gm9396-201ENSMUST00000076703 567 ntBASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp8Q9DB85 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.92□□□□□ -0.18
Rrp8Q9DB85 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.92□□□□□ -0.18
Rrp8Q9DB85 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp8Q9DB85 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms