Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Gm33142-201ENSMUST00000193913 867 ntBASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim42Q9D2H5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim42Q9D2H5 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim42Q9D2H5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim42Q9D2H5 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.27□□□□□ -0.13
Trim42Q9D2H5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim42Q9D2H5 Gm19891-201ENSMUST00000189771 303 ntBASIC14.27□□□□□ -0.13
Trim42Q9D2H5 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms