Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Hdhd3Q9CYW4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gm13464-201ENSMUST00000119418 935 ntBASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gm18246-201ENSMUST00000221023 728 ntBASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hdhd3Q9CYW4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm8749-201ENSMUST00000117737 331 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44357-201ENSMUST00000195897 142 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm19658-201ENSMUST00000196231 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44367-201ENSMUST00000196836 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44350-201ENSMUST00000197197 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44390-201ENSMUST00000197533 144 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44313-201ENSMUST00000198018 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44486-201ENSMUST00000198508 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44314-201ENSMUST00000199263 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44394-201ENSMUST00000199558 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44484-201ENSMUST00000199873 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44466-201ENSMUST00000200264 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm44359-201ENSMUST00000200671 138 ntBASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hdhd3Q9CYW4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hdhd3Q9CYW4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hdhd3Q9CYW4 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.6□□□□□ -0.55
Hdhd3Q9CYW4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hdhd3Q9CYW4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hdhd3Q9CYW4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms