Protein–RNA interactions for Protein: Q9CQJ1

Higd2a, HIG1 domain family member 2A, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Higd2aQ9CQJ1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.24□□□□□ -0.77
Higd2aQ9CQJ1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Higd2aQ9CQJ1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm15693-201ENSMUST00000120470 637 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm6222-201ENSMUST00000120787 396 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm9719-201ENSMUST00000162765 543 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm27618-201ENSMUST00000183671 60 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm6888-201ENSMUST00000221983 706 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Higd2aQ9CQJ1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Carlr-201ENSMUST00000181515 2574 ntBASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Gm20949-201ENSMUST00000206478 952 ntBASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Higd2aQ9CQJ1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms