Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ska1Q9CPV1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Acot6-202ENSMUST00000222921 3622 ntBASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ska1Q9CPV1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms