Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Gm6089-201ENSMUST00000197666 938 ntBASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Olfr286-202ENSMUST00000205305 969 ntBASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt88Q9CPR6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gm13418-201ENSMUST00000119097 944 ntBASIC12.88□□□□□ -0.35
Krt88Q9CPR6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gm8584-201ENSMUST00000171982 758 ntBASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gm5682-201ENSMUST00000173402 505 ntBASIC12.88□□□□□ -0.35
Krt88Q9CPR6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt88Q9CPR6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Gm7222-201ENSMUST00000117512 906 ntBASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.87□□□□□ -0.35
Krt88Q9CPR6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Gm2451-201ENSMUST00000199447 999 ntBASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Gm10290-201ENSMUST00000200451 999 ntBASIC12.87□□□□□ -0.35
Krt88Q9CPR6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Gm9182-201ENSMUST00000217829 639 ntBASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt88Q9CPR6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.86□□□□□ -0.35
Krt88Q9CPR6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt88Q9CPR6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt88Q9CPR6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Krt88Q9CPR6 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms