Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm11964-201ENSMUST00000120982 444 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Gm2445-201ENSMUST00000182798 989 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Nsd1-205ENSMUST00000224693 852 ntBASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh15Q99PJ1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Gm27341-201ENSMUST00000183570 106 ntBASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh15Q99PJ1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm11439-201ENSMUST00000118598 409 ntBASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Mir698-201ENSMUST00000102164 109 ntBASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm25668-201ENSMUST00000157700 129 ntBASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm29787-201ENSMUST00000222129 849 ntBASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh15Q99PJ1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms