Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tlr3Q99MB1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tlr3Q99MB1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tlr3Q99MB1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Tlr3Q99MB1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tlr3Q99MB1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tlr3Q99MB1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tlr3Q99MB1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tlr3Q99MB1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tlr3Q99MB1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm22065-201ENSMUST00000103753 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm22066-201ENSMUST00000103761 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24932-201ENSMUST00000103763 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24115-201ENSMUST00000103799 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm22190-201ENSMUST00000103827 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm22191-201ENSMUST00000103831 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24721-201ENSMUST00000103849 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm28018-201ENSMUST00000103869 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm26399-201ENSMUST00000103937 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm12882-201ENSMUST00000121696 517 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm25349-201ENSMUST00000177728 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm23616-201ENSMUST00000177797 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm25871-201ENSMUST00000177816 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24752-201ENSMUST00000178240 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24496-201ENSMUST00000178287 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm25649-201ENSMUST00000178476 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm25548-201ENSMUST00000178681 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm23147-201ENSMUST00000178841 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm26095-201ENSMUST00000179270 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm22171-201ENSMUST00000179283 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm23936-201ENSMUST00000179354 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm22619-201ENSMUST00000179516 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm25255-201ENSMUST00000179579 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24755-201ENSMUST00000179691 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm26506-201ENSMUST00000179692 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm25086-201ENSMUST00000179931 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm23243-201ENSMUST00000180047 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24659-201ENSMUST00000180212 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm24169-201ENSMUST00000180244 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm23689-201ENSMUST00000180354 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm27359-201ENSMUST00000184153 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm27785-201ENSMUST00000184268 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm27466-201ENSMUST00000184396 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Gm27703-201ENSMUST00000184836 110 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tlr3Q99MB1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tlr3Q99MB1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms