Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp1b1Q99LU0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp1b1Q99LU0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Gm14822-201ENSMUST00000122247 291 ntBASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1b1Q99LU0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1b1Q99LU0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1b1Q99LU0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms