Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.98□□□□□ -0.01
Clp1Q99LI9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clp1Q99LI9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gm24420-201ENSMUST00000176676 59 ntBASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gm24196-201ENSMUST00000179161 110 ntBASIC14.96□□□□□ -0.01
Clp1Q99LI9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gm29649-201ENSMUST00000185649 419 ntBASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Clp1Q99LI9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clp1Q99LI9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clp1Q99LI9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clp1Q99LI9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clp1Q99LI9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clp1Q99LI9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Gm15198-201ENSMUST00000117283 177 ntBASIC14.95□□□□□ -0.02
Clp1Q99LI9 Gm13689-201ENSMUST00000119360 685 ntBASIC14.95□□□□□ -0.02
Clp1Q99LI9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Clp1Q99LI9 Gm27772-201ENSMUST00000184900 187 ntBASIC14.95□□□□□ -0.02
Clp1Q99LI9 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.95□□□□□ -0.02
Clp1Q99LI9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms