Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.8□□□□□ -0.2
Vmp1Q99KU0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.79□□□□□ -0.2
Vmp1Q99KU0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.79□□□□□ -0.2
Vmp1Q99KU0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vmp1Q99KU0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Gm16026-204ENSMUST00000162652 683 ntBASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vmp1Q99KU0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.77□□□□□ -0.2
Vmp1Q99KU0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vmp1Q99KU0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vmp1Q99KU0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vmp1Q99KU0 Gm26308-201ENSMUST00000157768 69 ntBASIC13.77□□□□□ -0.21
Vmp1Q99KU0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms